diff --git a/src/localdb.ts b/src/localdb.ts
index e559e31..8d37e4a 100644
--- a/src/localdb.ts
+++ b/src/localdb.ts
@@ -330,7 +330,7 @@ export const clearDeleteRenameHistoryOfKeyAndVault = async (
 
 export const insertDeleteRecordByVault = async (
   db: InternalDBs,
-  fileOrFolder: TAbstractFile,
+  fileOrFolder: TAbstractFile | string,
   vaultRandomID: string
 ) => {
   // log.info(fileOrFolder);
@@ -347,6 +347,7 @@ export const insertDeleteRecordByVault = async (
       renameTo: "",
       vaultRandomID: vaultRandomID,
     };
+    await db.fileHistoryTbl.setItem(`${vaultRandomID}\t${k.key}`, k);
   } else if (fileOrFolder instanceof TFolder) {
     // key should endswith "/"
     const key = fileOrFolder.path.endsWith("/")
@@ -365,8 +366,57 @@ export const insertDeleteRecordByVault = async (
       renameTo: "",
       vaultRandomID: vaultRandomID,
     };
+    await db.fileHistoryTbl.setItem(`${vaultRandomID}\t${k.key}`, k);
+  } else if (typeof fileOrFolder === "string") {
+    // always the deletions in .obsidian folder
+    // so annoying that the path doesn't exists
+    // and we have to guess whether the path is folder or file
+    k = {
+      key: fileOrFolder,
+      ctime: 0,
+      mtime: 0,
+      size: 0,
+      actionWhen: Date.now(),
+      actionType: "delete",
+      keyType: "file",
+      renameTo: "",
+      vaultRandomID: vaultRandomID,
+    };
+    await db.fileHistoryTbl.setItem(`${vaultRandomID}\t${k.key}`, k);
+    for (const ext of [
+      "json",
+      "js",
+      "mjs",
+      "ts",
+      "md",
+      "txt",
+      "css",
+      "png",
+      "gif",
+      "jpg",
+      "jpeg",
+      "gitignore",
+      "gitkeep",
+    ]) {
+      if (fileOrFolder.endsWith(`.${ext}`)) {
+        // stop here, no more need to insert the folder record later
+        return;
+      }
+    }
+    // also add a deletion record as folder if not ending with special exts
+    k = {
+      key: `${fileOrFolder}/`,
+      ctime: 0,
+      mtime: 0,
+      size: 0,
+      actionWhen: Date.now(),
+      actionType: "delete",
+      keyType: "folder",
+      renameTo: "",
+      vaultRandomID: vaultRandomID,
+    };
+    await db.fileHistoryTbl.setItem(`${vaultRandomID}\t${k.key}`, k);
   }
-  await db.fileHistoryTbl.setItem(`${vaultRandomID}\t${k.key}`, k);
 };
 
 /**
diff --git a/src/main.ts b/src/main.ts
index da8add5..1751fd3 100644
--- a/src/main.ts
+++ b/src/main.ts
@@ -7,6 +7,8 @@ import {
   setIcon,
   FileSystemAdapter,
   Platform,
+  TFile,
+  TFolder,
 } from "obsidian";
 import cloneDeep from "lodash/cloneDeep";
 import { createElement, RotateCcw, RefreshCcw, FileText } from "lucide";
@@ -496,6 +498,31 @@ export default class RemotelySavePlugin extends Plugin {
       })
     );
 
+    function getMethods(obj: any) {
+      var result = [];
+      for (var id in obj) {
+        try {
+          if (typeof obj[id] == "function") {
+            result.push(id + ": " + obj[id].toString());
+          }
+        } catch (err) {
+          result.push(id + ": inaccessible");
+        }
+      }
+      return result.join("\n");
+    }
+    this.registerEvent(
+      this.app.vault.on("raw" as any, async (fileOrFolder) => {
+        // special track on .obsidian folder
+        const name = `${fileOrFolder}`;
+        if (name.startsWith(this.app.vault.configDir)) {
+          if (!(await this.app.vault.adapter.exists(name))) {
+            await insertDeleteRecordByVault(this.db, name, this.vaultRandomID);
+          }
+        }
+      })
+    );
+
     this.registerObsidianProtocolHandler(COMMAND_URI, async (inputParams) => {
       const parsed = importQrCodeUri(inputParams, this.app.vault.getName());
       if (parsed.status === "error") {
diff --git a/src/misc.ts b/src/misc.ts
index 897d3ba..406eeef 100644
--- a/src/misc.ts
+++ b/src/misc.ts
@@ -427,3 +427,31 @@ export const statFix = async (vault: Vault, path: string) => {
   }
   return s;
 };
+
+export const isFolderToSkip = (x: string, more: string[] | undefined) => {
+  let specialFolders = [
+    ".git",
+    ".github",
+    ".gitlab",
+    ".svn",
+    "node_modules",
+    ".DS_Store",
+    "__MACOSX ",
+    "Icon\r", // https://superuser.com/questions/298785/icon-file-on-os-x-desktop
+    "desktop.ini",
+    "Desktop.ini",
+    "thumbs.db",
+    "Thumbs.db",
+  ].concat(more !== undefined ? more : []);
+  for (const iterator of specialFolders) {
+    if (
+      x === iterator ||
+      x === `${iterator}/` ||
+      x.endsWith(`/${iterator}`) ||
+      x.endsWith(`/${iterator}/`)
+    ) {
+      return true;
+    }
+  }
+  return false;
+};
diff --git a/src/obsFolderLister.ts b/src/obsFolderLister.ts
index ce1671b..668d0ea 100644
--- a/src/obsFolderLister.ts
+++ b/src/obsFolderLister.ts
@@ -2,7 +2,7 @@ import { Vault, Stat, ListedFiles } from "obsidian";
 import { Queue } from "@fyears/tsqueue";
 import chunk from "lodash/chunk";
 import flatten from "lodash/flatten";
-import { statFix } from "./misc";
+import { statFix, isFolderToSkip } from "./misc";
 
 export interface ObsConfigDirFileType {
   key: string;
@@ -12,28 +12,6 @@ export interface ObsConfigDirFileType {
   type: "folder" | "file";
 }
 
-const isFolderToSkip = (x: string) => {
-  let specialFolders = [
-    ".git",
-    ".github",
-    ".gitlab",
-    ".svn",
-    "node_modules",
-    ".DS_Store",
-  ];
-  for (const iterator of specialFolders) {
-    if (
-      x === iterator ||
-      x === `${iterator}/` ||
-      x.endsWith(`/${iterator}`) ||
-      x.endsWith(`/${iterator}/`)
-    ) {
-      return true;
-    }
-  }
-  return false;
-};
-
 const isPluginDirItself = (x: string, pluginId: string) => {
   return (
     x === pluginId ||
@@ -106,7 +84,7 @@ export const listFilesInObsFolder = async (
         const isInsideSelfPlugin = isPluginDirItself(iter.itself.key, pluginId);
         if (iter.children !== undefined) {
           for (const iter2 of iter.children.folders) {
-            if (isFolderToSkip(iter2)) {
+            if (isFolderToSkip(iter2, ["workspace", "workspace.json"])) {
               continue;
             }
             if (isInsideSelfPlugin && !isLikelyPluginSubFiles(iter2)) {
@@ -116,7 +94,7 @@ export const listFilesInObsFolder = async (
             q.push(iter2);
           }
           for (const iter2 of iter.children.files) {
-            if (isFolderToSkip(iter2)) {
+            if (isFolderToSkip(iter2, ["workspace", "workspace.json"])) {
               continue;
             }
             if (isInsideSelfPlugin && !isLikelyPluginSubFiles(iter2)) {